Transcript: ENST00000178638.3 CA12-001

Description

carbonic anhydrase XII [Source:HGNC Symbol;Acc:1371]

Gene Synonyms

CAXII, HsT18816

Location

About this transcript

This transcript has 11 exons, is annotated with 12 domains and features, is associated with 26511 variant alleles and maps to 930 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000178638.3	CA12-001	6413	354aa	ENSP00000178638.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10185	O43570	NM_001218.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344366.3	CA12-002	2744	343aa	ENSP00000343088.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10186	O43570	NM_206925.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422263.2	CA12-003	2556	283aa	ENSP00000403028.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KUB4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560666.1	CA12-005	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558287.1	CA12-004	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000560293.1	CA12-006	538	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 6,413 bps, Translation length: 354 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43570

CCDS

This transcript is a member of the Human CCDS set: CCDS10185

Version

ENST00000178638.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256370 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.