Transcript: ENST00000406449.4 PVR-003

Description

poliovirus receptor [Source:HGNC Symbol;Acc:9705]

Gene Synonyms

CD155, HVED, NECL5, Necl-5, PVS, TAGE4, Tage4

Location

Chromosome 19: 45,147,397-45,162,362 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 21 domains and features, is associated with 7265 variant alleles and maps to 356 oligo probes.

Gene

This transcript is a product of gene ENSG00000073008.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000425690.3	PVR-001	3325	417aa	ENSP00000402060.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12640	P15151	NM_006505.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344956.4	PVR-006	3166	364aa	ENSP00000340870.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46106	P15151	NM_001135769.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403059.4	PVR-004	3078	372aa	ENSP00000385344.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46105	P15151	NM_001135768.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406449.4	PVR-003	1344	392aa	ENSP00000383907.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46107	P15151	NM_001135770.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587785.1	PVR-005	356	70aa	ENSP00000466447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000187830.2	PVR-002	3132	44aa	ENSP00000187830.2	Nonsense mediated decay		F8W7D4	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,344 bps, Translation length: 392 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P15151

CCDS

This transcript is a member of the Human CCDS set: CCDS46107

Version

ENST00000406449.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000323019 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000406449.4 PVR-003

Summary