Transcript: ENST00000571163.1 ALDH3A2-010

Description

aldehyde dehydrogenase 3 family, member A2 [Source:HGNC Symbol;Acc:403]

Gene Synonyms

ALDH10, FALDH, SLS

Location

Chromosome 17: 19,566,687-19,579,234 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 5108 variant alleles and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSG00000072210.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000176643.6	ALDH3A2-001	3928	485aa	ENSP00000176643.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11210	C9JGJ2 J3KTG1 K7EN73 P51648 Q59H65	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000339618.4	ALDH3A2-002	3828	508aa	ENSP00000345774.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32589	C9JGJ2 J3KTG1 K7EN73 P51648	NM_001031806.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395575.2	ALDH3A2-004	3640	485aa	ENSP00000378942.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11210	C9JGJ2 J3KTG1 K7EN73 P51648 Q59H65	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579855.1	ALDH3A2-022	3583	485aa	ENSP00000463637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11210	C9JGJ2 J3KTG1 K7EN73 P51648 Q59H65	NM_000382.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000581518.1	ALDH3A2-024	2785	508aa	ENSP00000461916.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32589	C9JGJ2 J3KTG1 K7EN73 P51648	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446398.2	ALDH3A2-006	665	166aa	ENSP00000395845.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JGJ2 J3KTG1 K7EN73	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000571537.1	ALDH3A2-008	607	162aa	ENSP00000458942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L1M4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000571163.1	ALDH3A2-010	590	97aa	ENSP00000459977.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L2W1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584332.2	ALDH3A2-018	573	126aa	ENSP00000466814.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EN73	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000580550.1	ALDH3A2-017	540	146aa	ENSP00000462964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTG1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000575384.2	ALDH3A2-012	450	85aa	ENSP00000461235.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L4G6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000578696.1	ALDH3A2-020	400	134aa	ENSP00000464453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000472059.1	ALDH3A2-003	3710	182aa	ENSP00000458397.1	Nonsense mediated decay		I3L0X1 J3KTG1	-	-
ENST00000582991.1	ALDH3A2-023	2152	393aa	ENSP00000464153.1	Nonsense mediated decay		C9JGJ2 J3KTD9 J3KTG1 J3QRD1 K7EN73	-	-
ENST00000573565.1	ALDH3A2-013	577	58aa	ENSP00000463924.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000573947.1	ALDH3A2-011	572	62aa	ENSP00000462933.1	Nonsense mediated decay		J3KTD9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000578614.1	ALDH3A2-019	527	54aa	ENSP00000463128.1	Nonsense mediated decay		J3QKK9	-	-
ENST00000574597.1	ALDH3A2-014	528	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000574078.2	ALDH3A2-009	436	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000573505.1	ALDH3A2-015	3512	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476965.1	ALDH3A2-005	1383	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467473.1	ALDH3A2-007	651	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000579403.1	ALDH3A2-016	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 590 bps, Translation length: 97 residues

Version

ENST00000571163.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs7216, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HapMap-HCB, CSHL-HAPMAP:HapMap-CEU, ESP6500:African_American, CSHL-HAPMAP:HapMap-JPT, ESP6500:European_American.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000441026 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000571163.1 ALDH3A2-010

Summary