Transcript: ENST00000438926.2 SLC12A3-001

Description

solute carrier family 12 (sodium/chloride transporter), member 3 [Source:HGNC Symbol;Acc:10912]

Gene Synonyms

NCC, NCCT, TSC

Location

Chromosome 16: 56,899,119-56,949,762 forward strand.

About this transcript

This transcript has 26 exons, is annotated with 23 domains and features, is associated with 24939 variant alleles and maps to 742 oligo probes.

Gene

This transcript is a product of gene ENSG00000070915.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000438926.2	SLC12A3-001	5567	1030aa	ENSP00000402152.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10770	P55017	NM_001126108.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563236.1	SLC12A3-005	4208	1021aa	ENSP00000456149.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58464	P55017	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000262502.5	SLC12A3-003	4208	1020aa	ENSP00000262502.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QSS1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566786.1	SLC12A3-002	3119	1029aa	ENSP00000457552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45491	P55017	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000563352.1	SLC12A3-007	787	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569002.1	SLC12A3-006	745	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 5,567 bps, Translation length: 1,030 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P55017

CCDS

This transcript is a member of the Human CCDS set: CCDS10770

Version

ENST00000438926.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257064 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000438926.2 SLC12A3-001

Summary