Transcript: ENST00000265421.4 POLB-001

Description

polymerase (DNA directed), beta [Source:HGNC Symbol;Acc:9174]

Location

Chromosome 8: 42,195,973-42,229,326 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 28 domains and features, is associated with 14407 variant alleles and maps to 487 oligo probes.

Gene

This transcript is a product of gene ENSG00000070501.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265421.4	POLB-001	1329	335aa	ENSP00000265421.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6129	B7Z1W5 E5RHZ4 E5RJ55 P06746 Q6LBJ9	NM_002690.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538005.1	POLB-201	1048	181aa	ENSP00000440497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z1W5 E5RHZ4 E5RJ55	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518925.1	POLB-005	983	280aa	ENSP00000430784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJ55 E7EW18 E9PIC6 Q6LBJ9 Q99910	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000521290.1	POLB-008	863	237aa	ENSP00000429597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHZ4 E5RJ55 Q6LBJ9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000521492.1	POLB-012	786	54aa	ENSP00000430831.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHZ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518579.1	POLB-016	744	239aa	ENSP00000430478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJ55 Q6LBJ9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000520008.1	POLB-002	725	51aa	ENSP00000430610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJ55	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532157.1	POLB-006	675	38aa	ENSP00000432084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIC6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000517393.1	POLB-011	401	106aa	ENSP00000428144.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000522610.1	POLB-015	1341	193aa	ENSP00000429436.1	Nonsense mediated decay		E5RIJ0	-	-
ENST00000519771.1	POLB-014	720	42aa	ENSP00000427799.1	Nonsense mediated decay		E5RG65	-	-
ENST00000524208.1	POLB-007	653	29aa	ENSP00000428578.1	Nonsense mediated decay		H0YB29	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000530566.1	POLB-018	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519524.1	POLB-010	655	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523465.1	POLB-009	649	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000521418.1	POLB-013	628	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522297.1	POLB-004	591	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519094.1	POLB-003	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 1,329 bps, Translation length: 335 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P06746

CCDS

This transcript is a member of the Human CCDS set: CCDS6129

Version

ENST00000265421.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000377242 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000265421.4 POLB-001

Summary