Transcript: ENST00000352189.3 TRPC7-003

Description

transient receptor potential cation channel, subfamily C, member 7 [Source:HGNC Symbol;Acc:20754]

Gene Synonyms

TRP7

Location

Chromosome 5: 135,549,123-135,693,073 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 22 domains and features, is associated with 59885 variant alleles and maps to 304 oligo probes.

Gene

This transcript is a product of gene ENSG00000069018.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000513104.1	TRPC7-001	2987	862aa	ENSP00000426070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47267	Q9HCX4	NM_020389.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355180.3	TRPC7-201	2752	801aa	ENSP00000347312.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54906	Q9HCX4	NM_001167577.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426057.2	TRPC7-202	2587	746aa	ENSP00000441628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54905	Q9HCX4	NM_001167576.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502753.2	TRPC7-006	2422	807aa	ENSP00000424854.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000378459.2	TRPC7-005	2404	801aa	ENSP00000367720.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000352189.3	TRPC7-003	2239	746aa	ENSP00000330322.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000503275.1	TRPC7-002	2603	380aa	ENSP00000421571.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514963.1	TRPC7-004	2022	261aa	ENSP00000426870.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514282.1	TRPC7-008	414	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509288.1	TRPC7-007	817	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,239 bps, Translation length: 746 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000352189.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000366977 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000352189.3 TRPC7-003

Summary