Transcript: ENST00000533030.1 SPI1-003

Description

spleen focus forming virus (SFFV) proviral integration oncogene [Source:HGNC Symbol;Acc:11241]

Gene Synonyms

OF, PU.1, SFPI1, SPI-1, SPI-A

Location

About this transcript

This transcript has 2 exons, is annotated with 1 domain and feature, is associated with 12090 variant alleles and maps to 257 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378538.3	SPI1-001	1403	270aa	ENSP00000367799.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7933	P17947	NM_003120.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533968.1	SPI1-002	1290	245aa	ENSP00000438846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H3K6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000227163.4	SPI1-004	1168	271aa	ENSP00000227163.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44591	P17947	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533030.1	SPI1-003	661	35aa	ENSP00000443865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZ94	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 661 bps, Translation length: 35 residues

Version

ENST00000533030.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000395644 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.