Transcript: ENST00000544418.1 BCAT1-005

Description

branched chain amino-acid transaminase 1, cytosolic [Source:HGNC Symbol;Acc:976]

Gene Synonyms

BCATC, BCT1, ECA39, MECA39, PNAS121, PP18

Location

Chromosome 12: 24,986,745-25,055,322 reverse strand.

About this transcript

This transcript has 9 exons, is associated with 30139 variant alleles and maps to 279 oligo probes.

Gene

This transcript is a product of gene ENSG00000060982.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261192.7	BCAT1-001	8335	386aa	ENSP00000261192.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44845	P54687	NM_005504.6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538118.1	BCAT1-006	4694	385aa	ENSP00000440817.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53760	P54687	NM_001178094.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342945.5	BCAT1-002	4319	325aa	ENSP00000339805.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53762	P54687	NM_001178092.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539282.1	BCAT1-004	1811	398aa	ENSP00000443459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53761	P54687	NM_001178093.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539780.1	BCAT1-003	1360	349aa	ENSP00000440827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53763	P54687	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546285.1	BCAT1-008	549	144aa	ENSP00000438593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H2F2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000544418.1	BCAT1-005	2320	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000543099.1	BCAT1-009	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000355164.3	BCAT1-007	521	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 0, Transcript length: 2,320 bps,

Version

ENST00000544418.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000402086 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000544418.1 BCAT1-005

Summary