Transcript: ENST00000369070.1 ATG5-003

Description

autophagy related 5 [Source:HGNC Symbol;Acc:589]

Gene Synonyms

APG5, APG5-LIKE, APG5L, ASP, hAPG5

Location

About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 59485 variant alleles and maps to 477 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369076.3	ATG5-001	3216	275aa	ENSP00000358072.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5055	A9UGY9 Q9H1Y0	NM_004849.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000343245.3	ATG5-002	3092	275aa	ENSP00000343313.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5055	A9UGY9 Q9H1Y0	NM_001286106.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369070.1	ATG5-003	3088	197aa	ENSP00000358066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69159	Q9H1Y0	NM_001286107.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360666.4	ATG5-201	2697	91aa	ENSP00000353884.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q7Z3H3	NM_001286111.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000475645.1	ATG5-005	2659	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476518.1	ATG5-004	602	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 3,088 bps, Translation length: 197 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H1Y0

CCDS

This transcript is a member of the Human CCDS set: CCDS69159

Version

ENST00000369070.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000043478 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.