Transcript: ENST00000440577.1 PUM2-003

Description

pumilio RNA-binding family member 2 [Source:HGNC Symbol;Acc:14958]

Gene Synonyms

KIAA0235, PUMH2, PUML2

Location

Chromosome 2: 20,449,625-20,512,017 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 38 domains and features, is associated with 28252 variant alleles and maps to 620 oligo probes.

Gene

This transcript is a product of gene ENSG00000055917.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361078.2	PUM2-202	6117	1066aa	ENSP00000354370.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JE24 C9JW01 Q8TB72	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000338086.5	PUM2-001	6112	1064aa	ENSP00000338173.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1698	B4E2B6 C9JE24 C9JW01 Q8TB72	NM_015317.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000319801.5	PUM2-201	5880	987aa	ENSP00000326746.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZL34 C9JE24 C9JW01 Q8TB72	NM_001282791.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440577.1	PUM2-003	4352	876aa	ENSP00000409905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TB72	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000403432.1	PUM2-002	3594	1064aa	ENSP00000385992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1698	B4E2B6 C9JE24 C9JW01 Q8TB72	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536417.1	PUM2-203	3404	1008aa	ENSP00000440093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E2B6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442400.1	PUM2-006	955	293aa	ENSP00000387399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JE24 C9JW01	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000424110.1	PUM2-009	546	34aa	ENSP00000395098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JE24	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000432105.1	PUM2-005	584	35aa	ENSP00000408384.1	Nonsense mediated decay		F2Z366	-	-
ENST00000429419.2	PUM2-008	547	40aa	ENSP00000396727.2	Nonsense mediated decay		F8WD57	-	-
ENST00000446940.1	PUM2-004	525	35aa	ENSP00000413515.1	Nonsense mediated decay		F2Z366	-	-
ENST00000420234.1	PUM2-007	562	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 4,352 bps, Translation length: 876 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TB72

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000440577.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000323918 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000440577.1 PUM2-003

Summary