Transcript: ENST00000377507.3 TNFRSF9-001

Description

tumor necrosis factor receptor superfamily, member 9 [Source:HGNC Symbol;Acc:11924]

Gene Synonyms

4-1BB, CD137, CDw137, ILA

Location

About this transcript

This transcript has 8 exons, is annotated with 15 domains and features, is associated with 9180 variant alleles and maps to 455 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377507.3	TNFRSF9-001	1923	255aa	ENSP00000366729.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS92	Q07011	NM_001561.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000474475.1	TNFRSF9-003	445	87aa	ENSP00000465272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJQ2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000492571.1	TNFRSF9-002	584	75aa	ENSP00000464978.1	Nonsense mediated decay		K7EJ11	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,923 bps, Translation length: 255 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q07011

CCDS

This transcript is a member of the Human CCDS set: CCDS92

Version

ENST00000377507.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000003622 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.