Transcript: ENST00000380647.3 CNTLN-001

Description

centlein, centrosomal protein [Source:HGNC Symbol;Acc:23432]

Gene Synonyms

C9orf101, C9orf39, FLJ20276, OTTHUMG00000019597, RP11-340N12.1, bA340N12.1

Location

About this transcript

This transcript has 26 exons, is annotated with 25 domains and features, is associated with 192116 variant alleles and maps to 768 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380647.3	CNTLN-001	5576	1406aa	ENSP00000370021.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43789	Q9NXG0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425824.1	CNTLN-202	5516	1406aa	ENSP00000392798.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1F9	NM_017738.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380641.4	CNTLN-004	4871	391aa	ENSP00000370015.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47953	Q9NXG0	NM_001114395.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000262360.5	CNTLN-201	4248	1405aa	ENSP00000262360.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KN33	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484374.1	CNTLN-003	2272	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461247.1	CNTLN-002	512	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 5,576 bps, Translation length: 1,406 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NXG0

CCDS

This transcript is a member of the Human CCDS set: CCDS43789

Version

ENST00000380647.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000051793 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.