Transcript: ENST00000307896.6 THAP3-003

Description

THAP domain containing, apoptosis associated protein 3 [Source:HGNC Symbol;Acc:20855]

Location

Chromosome 1: 6,685,241-6,693,428 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 4341 variant alleles and maps to 267 oligo probes.

Gene

This transcript is a product of gene ENSG00000041988.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000377627.3	THAP3-008	2053	175aa	ENSP00000366854.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS86	Q8WTV1	NM_138350.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000054650.4	THAP3-001	1366	239aa	ENSP00000054650.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55572	Q8WTV1	NM_001195753.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000307896.6	THAP3-003	1046	238aa	ENSP00000311537.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55573	Q8WTV1	NM_001195752.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472925.1	THAP3-005	983	231aa	ENSP00000473646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000487819.1	THAP3-004	840	124aa	ENSP00000464954.1	Nonsense mediated decay		K7EIZ2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000484676.1	THAP3-006	879	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484669.2	THAP3-002	744	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480647.1	THAP3-007	336	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,046 bps, Translation length: 238 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WTV1

CCDS

This transcript is a member of the Human CCDS set: CCDS55573

Version

ENST00000307896.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000004205 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000307896.6 THAP3-003

Summary