Transcript: ENST00000345230.3 TNC-202

Description

tenascin C [Source:HGNC Symbol;Acc:5318]

Gene Synonyms

150-225, DFNA56, GMEM, GP, HXB, JI, MGC167029, TN, TN-C

Location

Chromosome 9: 117,782,806-117,880,486 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 118 domains and features, is associated with 44097 variant alleles and maps to 755 oligo probes.

Gene

This transcript is a product of gene ENSG00000041982.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000350763.4	TNC-001	7641	2201aa	ENSP00000265131.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6811	F5H5D6 P24821	NM_002160.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000341037.4	TNC-011	6786	2019aa	ENSP00000339553.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5D6 J3QSU6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340094.3	TNC-201	6506	1837aa	ENSP00000344400.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5D6 P24821	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423613.2	TNC-009	6281	1928aa	ENSP00000411406.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PC84 F5H5D6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535648.1	TNC-204	6233	1746aa	ENSP00000438152.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5D6 P24821	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346706.3	TNC-203	5960	1655aa	ENSP00000344555.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5D6 P24821	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345230.3	TNC-202	5687	1564aa	ENSP00000345861.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5D6 P24821	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542877.1	TNC-007	5517	1838aa	ENSP00000442242.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A9YUB8 F5H5D6 F5H7V9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537320.1	TNC-012	4946	1564aa	ENSP00000443478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5D6 P24821	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544972.1	TNC-013	1844	615aa	ENSP00000445380.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000534839.1	TNC-010	734	92aa	ENSP00000443469.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H5D6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000481475.1	TNC-004	823	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476680.1	TNC-003	696	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460345.1	TNC-002	651	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498724.1	TNC-006	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473855.1	TNC-005	386	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 5,687 bps, Translation length: 1,564 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P24821

Version

ENST00000345230.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000345230.3 TNC-202

Summary