Transcript: ENST00000252029.3 TYMP-001

Description

thymidine phosphorylase [Source:HGNC Symbol;Acc:3148]

Gene Synonyms

ECGF, ECGF1, MEDPS1, MNGIE, MTDPS1, PDECGF, TP, hPD-ECGF

Location

Chromosome 22: 50,964,181-50,968,485 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 17 domains and features, is associated with 3443 variant alleles and maps to 498 oligo probes.

Gene

This transcript is a product of gene ENSG00000025708.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395681.1	TYMP-003	1604	487aa	ENSP00000379038.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58811	P19971	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000252029.3	TYMP-001	1630	482aa	ENSP00000252029.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14096	E5KRG5 P19971	NM_001953.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395678.3	TYMP-005	1614	482aa	ENSP00000379036.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14096	E5KRG5 P19971	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395680.1	TYMP-006	1608	482aa	ENSP00000379037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14096	E5KRG5 P19971	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425169.1	TYMP-008	1432	445aa	ENSP00000395875.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JGI3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000487162.1	TYMP-004	2049	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487577.1	TYMP-007	1751	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476284.1	TYMP-002	1572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,630 bps, Translation length: 482 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P19971

CCDS

This transcript is a member of the Human CCDS set: CCDS14096

Version

ENST00000252029.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000317081 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000252029.3 TYMP-001

Summary