Transcript: ENST00000554641.1 MNAT1-007

Description

MNAT CDK-activating kinase assembly factor 1 [Source:HGNC Symbol;Acc:7181]

Gene Synonyms

CAP35, MAT1, RNF66, TFB3

Location

Chromosome 14: 61,278,704-61,346,759 forward strand.

About this transcript

This transcript has 3 exons, is associated with 27860 variant alleles and maps to 189 oligo probes.

Gene

This transcript is a product of gene ENSG00000020426.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261245.4	MNAT1-001	2635	309aa	ENSP00000261245.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9750	H0YJ92 P51948	NM_002431.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539616.2	MNAT1-002	1220	267aa	ENSP00000446437.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53899	P51948	NM_001177963.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557134.1	MNAT1-008	680	169aa	ENSP00000451017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJ92	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554002.1	MNAT1-009	616	173aa	ENSP00000451379.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YJF2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000555545.1	MNAT1-004	612	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556525.1	MNAT1-006	469	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553354.1	MNAT1-005	277	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000556764.1	MNAT1-003	1097	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554641.1	MNAT1-007	596	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 596 bps,

Version

ENST00000554641.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000412784 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000554641.1 MNAT1-007

Summary