Transcript: ENST00000542670.1 SYT7-002

Description

synaptotagmin VII [Source:HGNC Symbol;Acc:11514]

Gene Synonyms

IPCA-7, IPCA7, MGC150517, PCANAP7, SYT-VII, SYTVII

Location

Chromosome 11: 61,286,099-61,348,343 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 22 domains and features, is associated with 26770 variant alleles and maps to 487 oligo probes.

Gene

This transcript is a product of gene ENSG00000011347.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263846.4	SYT7-001	4854	403aa	ENSP00000263846.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31577	F5H8G7 O43581	NM_004200.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539008.1	SYT7-007	2061	686aa	ENSP00000439694.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H126	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540677.1	SYT7-003	2013	478aa	ENSP00000444201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58139	O43581	NM_001252065.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542670.1	SYT7-002	1887	611aa	ENSP00000444019.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1N2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535826.1	SYT7-006	1621	522aa	ENSP00000437720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6C1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542836.1	SYT7-008	1362	447aa	ENSP00000444568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZC2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545053.1	SYT7-011	578	175aa	ENSP00000443576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H8G7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000539468.1	SYT7-005	2186	122aa	ENSP00000441184.1	Nonsense mediated decay		F5GX00	-	-
ENST00000539246.1	SYT7-004	1961	122aa	ENSP00000438171.1	Nonsense mediated decay		F5GX00	-	-
ENST00000540831.1	SYT7-009	723	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,887 bps, Translation length: 611 residues

Version

ENST00000542670.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000398739 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000542670.1 SYT7-002

Summary