Transcript: ENST00000337495.5 SCMH1-003

Description

sex comb on midleg homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:19003]

Gene Synonyms

Scml3

Location

Chromosome 1: 41,492,874-41,707,782 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 21 domains and features, is associated with 86096 variant alleles and maps to 493 oligo probes.

Gene

This transcript is a product of gene ENSG00000010803.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000402904.2	SCMH1-205	3346	660aa	ENSP00000386079.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30688	Q96GD3	NM_001031694.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372596.1	SCMH1-002	3323	577aa	ENSP00000361677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53301	Q96GD3	NM_001172218.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397174.2	SCMH1-204	3280	618aa	ENSP00000380359.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KPV8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000326197.7	SCMH1-005	3275	660aa	ENSP00000318094.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30688	Q96GD3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372597.1	SCMH1-001	3252	591aa	ENSP00000361678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS461	Q96GD3	NM_012236.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372595.1	SCMH1-004	3231	599aa	ENSP00000361676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53302	Q96GD3	NM_001172221.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397171.2	SCMH1-203	3186	577aa	ENSP00000380356.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53301	Q96GD3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361705.3	SCMH1-202	3115	591aa	ENSP00000354996.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS461	Q96GD3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337495.5	SCMH1-003	3108	648aa	ENSP00000337352.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53304	Q96GD3	NM_001172219.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361191.5	SCMH1-201	2906	577aa	ENSP00000354656.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53301	Q96GD3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456518.2	SCMH1-206	2640	480aa	ENSP00000403974.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53303	Q96GD3	NM_001172222.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472037.1	SCMH1-006	735	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489421.1	SCMH1-007	687	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498793.1	SCMH1-008	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482530.1	SCMH1-009	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460215.1	SCMH1-010	447	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488592.1	SCMH1-011	363	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 3,108 bps, Translation length: 648 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96GD3

CCDS

This transcript is a member of the Human CCDS set: CCDS53304

Version

ENST00000337495.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000015654 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000337495.5 SCMH1-003

Summary