Transcript: ENST00000536590.1 CD4-009

Description

CD4 molecule [Source:HGNC Symbol;Acc:1678]

Gene Synonyms

CD4mut, CD4receptor

Location

Chromosome 12: 6,898,706-6,923,424 forward strand.

About this transcript

This transcript has 5 exons, is associated with 12785 variant alleles and maps to 205 oligo probes.

Gene

This transcript is a product of gene ENSG00000010610.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000011653.4	CD4-001	3114	458aa	ENSP00000011653.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8562	B4DT49 F5GYA9 P01730 Q13969 Q6LCP8	NM_001195017.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541982.1	CD4-005	1187	148aa	ENSP00000445167.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H480	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539492.1	CD4-007	579	45aa	ENSP00000440720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GYA9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000538827.1	CD4-004	985	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536610.1	CD4-012	608	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536563.1	CD4-011	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000535466.1	CD4-008	588	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000535707.1	CD4-013	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000536590.1	CD4-009	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000437800.2	CD4-003	2117	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000544344.1	CD4-006	1056	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000543755.1	CD4-010	494	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 561 bps,

Version

ENST00000536590.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000399986 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000536590.1 CD4-009

Summary