Transcript: ENST00000426905.3 ELAC2-012

Description

elaC ribonuclease Z 2 [Source:HGNC Symbol;Acc:14198]

Gene Synonyms

COXPD17, ELC2, FLJ10530, HPC2

Location

Chromosome 17: 12,895,877-12,921,316 reverse strand.

About this transcript

This transcript has 23 exons, is annotated with 9 domains and features, is associated with 13473 variant alleles and maps to 592 oligo probes.

Gene

This transcript is a product of gene ENSG00000006744.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000338034.4	ELAC2-001	3148	826aa	ENSP00000337445.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11164	B4DT15 J3QL08 J3QRS2 Q9BQ52 Q9HAS7	NM_173717.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395962.2	ELAC2-002	2924	807aa	ENSP00000379291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G5E9D5 J3QL08 J3QRS2 Q9HAS7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000426905.3	ELAC2-012	2671	786aa	ENSP00000405223.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54093	Q9BQ52	NM_001165962.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584650.1	ELAC2-013	2087	626aa	ENSP00000463740.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9HAS7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000609101.1	ELAC2-021	866	242aa	ENSP00000477044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QL08 J3QRS2 Q9HAS7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000446899.1	ELAC2-007	858	286aa	ENSP00000406192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000609757.1	ELAC2-022	588	124aa	ENSP00000477093.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRS2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000581499.2	ELAC2-017	581	132aa	ENSP00000463321.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QL08 J3QRS2 Q9HAS7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000580504.1	ELAC2-020	579	148aa	ENSP00000463594.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QLK4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000578071.1	ELAC2-015	579	158aa	ENSP00000477482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000583371.1	ELAC2-016	479	122aa	ENSP00000464358.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRS2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000476042.1	ELAC2-009	428	45aa	ENSP00000463884.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000609345.1	ELAC2-023	849	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484122.1	ELAC2-003	3738	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465825.1	ELAC2-006	2793	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480891.1	ELAC2-004	2737	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487229.2	ELAC2-014	2452	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491478.1	ELAC2-011	758	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578104.1	ELAC2-018	664	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492559.1	ELAC2-010	615	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578991.1	ELAC2-019	550	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 2,671 bps, Translation length: 786 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BQ52

CCDS

This transcript is a member of the Human CCDS set: CCDS54093

Version

ENST00000426905.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000441600 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000426905.3 ELAC2-012

Summary