Transcript: ENST00000419929.1 LASP1-002

Description

LIM and SH3 protein 1 [Source:HGNC Symbol;Acc:6513]

Gene Synonyms

Lasp-1, MLN50

Location

Chromosome 17: 37,030,143-37,071,394 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features, is associated with 17998 variant alleles and maps to 207 oligo probes.

Gene

This transcript is a product of gene ENSG00000002834.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318008.6	LASP1-001	4109	261aa	ENSP00000325240.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11331	C9J9W2 Q14847	NM_006148.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435347.3	LASP1-202	3492	261aa	ENSP00000392853.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11331	C9J9W2 Q14847	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000579123.1	LASP1-008	1874	105aa	ENSP00000462564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSN1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000433206.2	LASP1-201	1408	205aa	ENSP00000401048.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62164	B4DGQ0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419929.1	LASP1-002	762	166aa	ENSP00000391897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9W2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000443937.3	LASP1-005	1482	91aa	ENSP00000414803.3	Nonsense mediated decay		F6S2S5	-	-
ENST00000585841.1	LASP1-003	1408	71aa	ENSP00000468664.1	Nonsense mediated decay		K7ESD6	-	-
ENST00000584106.1	LASP1-004	1167	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000581485.1	LASP1-009	617	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 762 bps, Translation length: 166 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000419929.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000256891 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000419929.1 LASP1-002

Summary