Transcript: ENST00000560142.1 CSH2-002

Description

chorionic somatomammotropin hormone 2 [Source:HGNC Symbol;Acc:2441]

Gene Synonyms

CS-1, CS-2, CSA, CSB, CSMT, PL, hCS-1, hCS-A, hCS-B

Location

Chromosome 17: 61,949,372-61,951,126 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 1325 variant alleles and maps to 1151 oligo probes.

Gene

This transcript is a product of gene ENSG00000213218.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392886.2	CSH2-001	920	217aa	ENSP00000376623.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42369	P01243 P78451 Q7KZ35	NM_020991.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336844.5	CSH2-004	1173	167aa	ENSP00000338816.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11646	A6NIT4	NM_022644.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000560142.1	CSH2-002	749	160aa	ENSP00000453452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YM39 Q7KZ35	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345366.7	CSH2-201	599	122aa	ENSP00000308396.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42368	B1A4H9 Q7KZ35	NM_022645.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559928.1	CSH2-005	1660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558516.1	CSH2-006	1172	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 749 bps, Translation length: 160 residues

Version

ENST00000560142.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000417659 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000560142.1 CSH2-002

Summary