Transcript: ENST00000485929.1 ASIC3-009

Description

acid-sensing (proton-gated) ion channel 3 [Source:HGNC Symbol;Acc:101]

Gene Synonyms

ACCN3, DRASIC, SLNAC1, TNAC1, TNaC1

Location

Chromosome 7: 150,748,007-150,749,841 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 7 domains and features, is associated with 1364 variant alleles and maps to 270 oligo probes.

Gene

This transcript is a product of gene ENSG00000213199.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000297512.8	ASIC3-005	1718	549aa	ENSP00000297512.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5915	Q9UHC3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357922.4	ASIC3-001	2232	543aa	ENSP00000350600.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5914	Q9UHC3	NM_020322.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000349064.5	ASIC3-003	1895	531aa	ENSP00000344838.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5916	Q9UHC3	NM_020321.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490540.1	ASIC3-007	520	149aa	ENSP00000418361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C4W0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000485929.1	ASIC3-009	502	144aa	ENSP00000420371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000377904.4	ASIC3-002	2096	407aa	ENSP00000367136.4	Nonsense mediated decay		Q9UHC3	-	-
ENST00000468325.1	ASIC3-004	1668	407aa	ENSP00000418605.1	Nonsense mediated decay		Q9UHC3	-	-
ENST00000498105.1	ASIC3-008	825	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474135.1	ASIC3-006	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 502 bps, Translation length: 144 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000485929.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000351769 (version 1)

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Transcript: ENST00000485929.1 ASIC3-009

Summary