Transcript: ENST00000392824.4 CSHL1-201

Description

chorionic somatomammotropin hormone-like 1 [Source:HGNC Symbol;Acc:2442]

Gene Synonyms

CS-5, CSHP1, CSL, MGC149868, hCS-L

Location

Chromosome 17: 61,987,242-61,996,198 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 6721 variant alleles and maps to 1173 oligo probes.

Gene

This transcript is a product of gene ENSG00000204414.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000309894.5	CSHL1-009	669	222aa	ENSP00000309524.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11652	I6L999 Q14406	NM_022579.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392824.4	CSHL1-201	1022	173aa	ENSP00000376569.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QT06	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450719.3	CSHL1-006	973	167aa	ENSP00000413501.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C3R7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561003.1	CSHL1-003	880	178aa	ENSP00000452900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKQ4 H7C3R7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000259003.10	CSHL1-002	739	160aa	ENSP00000259003.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I6L999	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346606.6	CSHL1-001	659	128aa	ENSP00000316360.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42370	I6L999 Q14406	NM_001318.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438387.2	CSHL1-008	566	139aa	ENSP00000402632.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45759	I6L999 Q14406	NM_022581.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558099.1	CSHL1-004	1590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560999.1	CSHL1-007	1602	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558609.1	CSHL1-005	1081	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,022 bps, Translation length: 173 residues

Version

ENST00000392824.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000392824.4 CSHL1-201

Summary