Transcript: ENST00000542132.1 OCLN-203

Description

occludin [Source:HGNC Symbol;Acc:8104]

Gene Synonyms

BLCPMG

Location

Chromosome 5: 68,800,028-68,849,539 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 17683 variant alleles and maps to 315 oligo probes.

Gene

This transcript is a product of gene ENSG00000197822.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355237.2	OCLN-001	6438	522aa	ENSP00000347379.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4006	Q16625	NM_002538.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380766.2	OCLN-201	2218	468aa	ENSP00000370143.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q16625	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396442.2	OCLN-002	1748	522aa	ENSP00000379719.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4006	Q16625	NM_001205254.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538151.1	OCLN-202	975	271aa	ENSP00000445940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54864	Q16625	NM_001205255.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542132.1	OCLN-203	813	200aa	ENSP00000440000.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q16625	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514370.1	OCLN-003	958	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510666.1	OCLN-004	732	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 813 bps, Translation length: 200 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16625

Version

ENST00000542132.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000542132.1 OCLN-203

Summary