Description
RAB40C, member RAS oncogene family [Source:HGNC Symbol;Acc:18285]
Gene Synonyms
RARL, RASL8C
Location
Chromosome 16: 640,077-679,271 forward strand.
About this transcript
This transcript has 7 exons, is annotated with 21 domains and features, is associated with 21188 variant alleles and maps to 403 oligo probes.
Gene
This transcript is a product of gene ENSG00000197562.5 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000535977.1 | RAB40C-201 | 2717 | 281aa | ENSP00000438492.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10413 | H3BME4 H3BMH4 H3BNV8 H3BTC6 Q5PXE8 Q96S21 | NM_001172663.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000248139.3 | RAB40C-001 | 2699 | 281aa | ENSP00000248139.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10413 | H3BME4 H3BMH4 H3BNV8 H3BTC6 Q5PXE8 Q96S21 | NM_021168.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000539661.1 | RAB40C-203 | 2609 | 281aa | ENSP00000445050.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10413 | H3BME4 H3BMH4 H3BNV8 H3BTC6 Q5PXE8 Q96S21 | NM_001172664.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000538492.1 | RAB40C-202 | 2569 | 281aa | ENSP00000438382.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10413 | H3BME4 H3BMH4 H3BNV8 H3BTC6 Q5PXE8 Q96S21 | NM_001172666.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000564703.1 | RAB40C-005 | 921 | 38aa | ENSP00000454383.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMH4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000566290.1 | RAB40C-008 | 753 | 213aa | ENSP00000455029.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BME4 H3BMH4 H3BNV8 H3BTC6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000563109.1 | RAB40C-003 | 710 | 237aa | ENSP00000455225.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMH4 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000569575.1 | RAB40C-007 | 692 | 156aa | ENSP00000454347.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BME4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000568586.1 | RAB40C-009 | 648 | 188aa | ENSP00000457116.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BME4 H3BMH4 H3BTC6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000565511.1 | RAB40C-004 | 783 | 130aa | ENSP00000457845.1 | Nonsense mediated decay | H3BUX0 | - | - | |
| ENST00000509637.2 | RAB40C-006 | 565 | 49aa | ENSP00000455232.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000561781.1 | RAB40C-002 | 2439 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |