Transcript: ENST00000429722.2 ALKBH2-007

Description

alkB, alkylation repair homolog 2 (E. coli) [Source:HGNC Symbol;Acc:32487]

Gene Synonyms

ABH2, MGC90512

Location

Chromosome 12: 109,526,002-109,531,264 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 2393 variant alleles and maps to 338 oligo probes.

Gene

This transcript is a product of gene ENSG00000189046.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000429722.2	ALKBH2-007	1159	261aa	ENSP00000398181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31897	F5GZZ0 F5H5X2 Q6NS38	NM_001145374.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536358.1	ALKBH2-008	1049	121aa	ENSP00000444103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZZ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000343075.3	ALKBH2-001	1028	261aa	ENSP00000343021.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31897	F5GZZ0 F5H5X2 Q6NS38	NM_001145375.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543444.1	ALKBH2-009	834	149aa	ENSP00000474702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000440112.2	ALKBH2-003	574	157aa	ENSP00000399820.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55883	L8E7L5 Q6NS38	NM_001205180.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536242.1	ALKBH2-005	572	150aa	ENSP00000443042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZZ0 F5H5X2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536720.1	ALKBH2-004	1068	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,159 bps, Translation length: 261 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6NS38

CCDS

This transcript is a member of the Human CCDS set: CCDS31897

Version

ENST00000429722.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000403063 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000429722.2 ALKBH2-007

Summary