Transcript: ENST00000543444.1 ALKBH2-009

Description

alkB, alkylation repair homolog 2 (E. coli) [Source:HGNC Symbol;Acc:32487]

Gene Synonyms

ABH2, MGC90512

Location

Chromosome 12: 109,527,425-109,530,557 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 3 domains and features, is associated with 1428 variant alleles and maps to 149 oligo probes.

Gene

This transcript is a product of gene ENSG00000189046.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000429722.2	ALKBH2-007	1159	261aa	ENSP00000398181.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31897	F5GZZ0 F5H5X2 Q6NS38	NM_001145374.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536358.1	ALKBH2-008	1049	121aa	ENSP00000444103.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZZ0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000343075.3	ALKBH2-001	1028	261aa	ENSP00000343021.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31897	F5GZZ0 F5H5X2 Q6NS38	NM_001145375.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543444.1	ALKBH2-009	834	149aa	ENSP00000474702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000440112.2	ALKBH2-003	574	157aa	ENSP00000399820.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55883	L8E7L5 Q6NS38	NM_001205180.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536242.1	ALKBH2-005	572	150aa	ENSP00000443042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GZZ0 F5H5X2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000536720.1	ALKBH2-004	1068	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 834 bps, Translation length: 149 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000543444.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000403062 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000543444.1 ALKBH2-009

Summary