Transcript: ENST00000484822.1 RXRA-003

Description

retinoid X receptor, alpha [Source:HGNC Symbol;Acc:10477]

Gene Synonyms

NR2B1

Location

About this transcript

This transcript has 3 exons, is associated with 45802 variant alleles and maps to 95 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000481739.1	RXRA-002	1846	462aa	ENSP00000419692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35172	B3KY83 F1D8Q5 P19793 Q6P3U7	NM_002957.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540193.1	RXRA-201	2421	365aa	ENSP00000442123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KY83	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356384.4	RXRA-001	5770	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484822.1	RXRA-003	5215	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 5,215 bps,

Version

ENST00000484822.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000054950 (version 2)