Transcript: ENST00000546933.1 PPP1CC-004

Description

protein phosphatase 1, catalytic subunit, gamma isozyme [Source:HGNC Symbol;Acc:9283]

Gene Synonyms

PP-1G, PP1C, PP1gamma, PPP1G

Location

Chromosome 12: 111,158,726-111,170,788 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 15 domains and features, is associated with 5351 variant alleles and maps to 255 oligo probes.

Gene

This transcript is a product of gene ENSG00000186298.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000340766.5	PPP1CC-002	1472	337aa	ENSP00000341779.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58279	C4TNW5 C4TNW6 P36873 Q9UPN1	NM_001244974.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000335007.5	PPP1CC-001	2559	323aa	ENSP00000335084.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9150	B4DNE3 C4TNW5 C4TNW6 P36873 Q9UPN1	NM_002710.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546933.1	PPP1CC-004	2154	332aa	ENSP00000447122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DNE3 C4TNW5 C4TNW6 F8W0W8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550991.1	PPP1CC-010	1882	304aa	ENSP00000448981.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C4TNW5 C4TNW6 F8VYE8 Q9UPN1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551676.1	PPP1CC-009	1581	270aa	ENSP00000448437.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C4TNW5 F8VR82	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000551582.1	PPP1CC-007	563	83aa	ENSP00000447090.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W1A0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000550261.1	PPP1CC-005	747	54aa	ENSP00000447528.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000551690.1	PPP1CC-003	603	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553024.1	PPP1CC-006	2797	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546904.1	PPP1CC-008	1133	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,154 bps, Translation length: 332 residues

Version

ENST00000546933.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000404665 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000546933.1 PPP1CC-004

Summary