Transcript: ENST00000466861.1 SUMO3-004

Description

small ubiquitin-like modifier 3 [Source:HGNC Symbol;Acc:11124]

Gene Synonyms

SMT3A, SMT3B, SMT3H1, SUMO-3, Smt3B

Location

Chromosome 21: 46,233,425-46,238,020 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 2816 variant alleles and maps to 108 oligo probes.

Gene

This transcript is a product of gene ENSG00000184900.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000332859.6	SUMO3-001	1807	103aa	ENSP00000330343.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33587	P55854	NM_006936.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397898.3	SUMO3-002	1779	135aa	ENSP00000380995.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MUA9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411651.2	SUMO3-201	831	141aa	ENSP00000409666.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68220	B4DUW4	NM_001286416.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397893.3	SUMO3-005	520	147aa	ENSP00000380990.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MU27	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479153.1	SUMO3-003	1736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466861.1	SUMO3-004	753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 753 bps,

Version

ENST00000466861.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000206563 (version 1)

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Transcript: ENST00000466861.1 SUMO3-004

Summary