Transcript: ENST00000332859.6 SUMO3-001

Description

small ubiquitin-like modifier 3 [Source:HGNC Symbol;Acc:11124]

Gene Synonyms

SMT3A, SMT3B, SMT3H1, SUMO-3, Smt3B

Location

Chromosome 21: 46,225,532-46,238,044 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 6707 variant alleles and maps to 373 oligo probes.

Gene

This transcript is a product of gene ENSG00000184900.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000332859.6	SUMO3-001	1807	103aa	ENSP00000330343.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33587	P55854	NM_006936.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397898.3	SUMO3-002	1779	135aa	ENSP00000380995.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MUA9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000411651.2	SUMO3-201	831	141aa	ENSP00000409666.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS68220	B4DUW4	NM_001286416.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397893.3	SUMO3-005	520	147aa	ENSP00000380990.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MU27	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479153.1	SUMO3-003	1736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466861.1	SUMO3-004	753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,807 bps, Translation length: 103 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P55854

CCDS

This transcript is a member of the Human CCDS set: CCDS33587

Version

ENST00000332859.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000206560 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000332859.6 SUMO3-001

Summary