Transcript: ENST00000509503.1 EFNA5-003

Description

ephrin-A5 [Source:HGNC Symbol;Acc:3225]

Gene Synonyms

AF1, EFL5, EPLG7, GLC1M, LERK7, RAGS

Location

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 127591 variant alleles and maps to 115 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000333274.6	EFNA5-001	5335	228aa	ENSP00000328777.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4097	P52803	NM_001962.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509503.1	EFNA5-003	637	201aa	ENSP00000426989.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDV5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510359.1	EFNA5-004	606	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505499.1	EFNA5-005	349	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504941.1	EFNA5-002	931	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 637 bps, Translation length: 201 residues

Version

ENST00000509503.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000370506 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.