Transcript: ENST00000576718.1 POLR2A-007

Description

polymerase (RNA) II (DNA directed) polypeptide A, 220kDa [Source:HGNC Symbol;Acc:9187]

Gene Synonyms

POLR2, POLRA, RPB1, RPBh1, RPO2, RPOL2, RpIILS, hRPB220, hsRPB1

Location

Chromosome 17: 7,406,240-7,406,974 forward strand.

About this transcript

This transcript has 3 exons, is associated with 447 variant alleles and maps to 58 oligo probes.

Gene

This transcript is a product of gene ENSG00000181222.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322644.6	POLR2A-001	6749	1970aa	ENSP00000314949.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32548	P24928	NM_000937.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000572844.1	POLR2A-002	2083	566aa	ENSP00000461879.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6NX41	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000575547.1	POLR2A-006	702	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000573603.1	POLR2A-009	648	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576553.1	POLR2A-010	602	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576718.1	POLR2A-007	548	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576952.1	POLR2A-005	532	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000574158.1	POLR2A-011	461	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576114.1	POLR2A-008	245	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 548 bps,

Version

ENST00000576718.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000437973 (version 1)

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Transcript: ENST00000576718.1 POLR2A-007

Summary