Transcript: ENST00000534402.1 ABCG4-006

Description

ATP-binding cassette, sub-family G (WHITE), member 4 [Source:HGNC Symbol;Acc:13884]

Gene Synonyms

WHITE2

Location

Chromosome 11: 119,026,340-119,029,205 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 1274 variant alleles and maps to 166 oligo probes.

Gene

This transcript is a product of gene ENSG00000172350.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307417.3	ABCG4-001	3849	646aa	ENSP00000304111.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8415	E9PJ00 Q9H172 Q9NT30	NM_022169.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531739.1	ABCG4-003	2552	646aa	ENSP00000434318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8415	E9PJ00 Q9H172 Q9NT30	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449422.2	ABCG4-002	2458	646aa	ENSP00000406874.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8415	E9PJ00 Q9H172 Q9NT30	NM_001142505.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534402.1	ABCG4-006	1454	121aa	ENSP00000434571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPE3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000524604.1	ABCG4-005	496	152aa	ENSP00000431915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ00	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533694.1	ABCG4-004	2719	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,454 bps, Translation length: 121 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000534402.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000388463 (version 1)

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Transcript: ENST00000534402.1 ABCG4-006

Summary