Transcript: ENST00000531739.1 ABCG4-003

Description

ATP-binding cassette, sub-family G (WHITE), member 4 [Source:HGNC Symbol;Acc:13884]

Gene Synonyms

WHITE2

Location

Chromosome 11: 119,020,606-119,032,357 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 21 domains and features, is associated with 5234 variant alleles and maps to 407 oligo probes.

Gene

This transcript is a product of gene ENSG00000172350.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000307417.3	ABCG4-001	3849	646aa	ENSP00000304111.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8415	E9PJ00 Q9H172 Q9NT30	NM_022169.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531739.1	ABCG4-003	2552	646aa	ENSP00000434318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8415	E9PJ00 Q9H172 Q9NT30	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449422.2	ABCG4-002	2458	646aa	ENSP00000406874.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8415	E9PJ00 Q9H172 Q9NT30	NM_001142505.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534402.1	ABCG4-006	1454	121aa	ENSP00000434571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPE3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000524604.1	ABCG4-005	496	152aa	ENSP00000431915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ00	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533694.1	ABCG4-004	2719	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,552 bps, Translation length: 646 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H172

CCDS

This transcript is a member of the Human CCDS set: CCDS8415

Version

ENST00000531739.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000388216 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000531739.1 ABCG4-003

Summary