Transcript: ENST00000489240.1 C9orf16-004

Description

chromosome 9 open reading frame 16 [Source:HGNC Symbol;Acc:17823]

Gene Synonyms

EST00098, FLJ12823, MGC4639

Location

About this transcript

This transcript has 3 exons, is associated with 1449 variant alleles and maps to 392 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000372994.1	C9orf16-001	713	83aa	ENSP00000362085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6893	Q9BUW7	NM_024112.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492588.1	C9orf16-002	1570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489240.1	C9orf16-004	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486420.1	C9orf16-003	434	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 573 bps,

Version

ENST00000489240.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000054354 (version 1)