Transcript: ENST00000429617.1 CASP7-004

Description

caspase 7, apoptosis-related cysteine peptidase [Source:HGNC Symbol;Acc:1508]

Gene Synonyms

CASP-7, CMH-1, ICE-LAP3, LICE2, MCH3

Location

Chromosome 10: 115,438,942-115,486,178 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 13 domains and features, is associated with 19714 variant alleles and maps to 191 oligo probes.

Gene

This transcript is a product of gene ENSG00000165806.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369321.2	CASP7-201	2694	336aa	ENSP00000358327.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7580	P55210 Q5SVL2	NM_033338.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345633.4	CASP7-005	2659	303aa	ENSP00000298701.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7581	P55210 Q5SVL2	NM_033339.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369315.1	CASP7-002	2421	303aa	ENSP00000358321.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7581	P55210 Q5SVL2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369331.4	CASP7-003	2380	253aa	ENSP00000358337.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7582	P55210	NM_033340.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369318.3	CASP7-001	2377	303aa	ENSP00000358324.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7581	P55210 Q5SVL2	NM_001267057.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452490.2	CASP7-202	1148	278aa	ENSP00000398107.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58096	P55210	NM_001267058.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429617.1	CASP7-004	834	222aa	ENSP00000400094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SVL2	NM_001267056.1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000468790.1	CASP7-007	607	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487232.1	CASP7-008	799	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 834 bps, Translation length: 222 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000429617.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000050438 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000429617.1 CASP7-004

Summary