Transcript: ENST00000382872.1 NLGN4Y-001

Description

neuroligin 4, Y-linked [Source:HGNC Symbol;Acc:15529]

Gene Synonyms

KIAA0951

Location

Chromosome Y: 16,634,632-16,957,530 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 18427 variant alleles and maps to 435 oligo probes.

Gene

This transcript is a product of gene ENSG00000165246.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355905.2	NLGN4Y-002	5167	816aa	ENSP00000348169.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14788	Q8NFZ3	NM_014893.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000382872.1	NLGN4Y-001	6617	648aa	ENSP00000372325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56619	Q8NFZ3	-	-
ENST00000382868.1	NLGN4Y-003	5338	873aa	ENSP00000372320.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NMU8	-	-
ENST00000339174.5	NLGN4Y-005	5310	816aa	ENSP00000342535.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14788	Q8NFZ3	-	-
ENST00000297967.5	NLGN4Y-201	882	256aa	ENSP00000297967.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55553	Q8NFZ3	NM_001164238.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413217.1	NLGN4Y-006	722	236aa	ENSP00000412638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000476359.1	NLGN4Y-004	5460	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471252.1	NLGN4Y-007	793	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481089.1	NLGN4Y-008	540	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 6,617 bps, Translation length: 648 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NFZ3

CCDS

This transcript is a member of the Human CCDS set: CCDS56619

Version

ENST00000382872.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000089061 (version 3)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000382872.1 NLGN4Y-001

Summary