Transcript: ENST00000297229.2 USP49-201

Description

ubiquitin specific peptidase 49 [Source:HGNC Symbol;Acc:20078]

Gene Synonyms

MGC20741

Location

Chromosome 6: 41,765,384-41,839,381 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 17 domains and features, is associated with 30634 variant alleles and maps to 329 oligo probes.

Gene

This transcript is a product of gene ENSG00000164663.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373006.1	USP49-001	3177	640aa	ENSP00000362097.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4861	A6PVU2 Q70CQ1	NM_018561.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394253.3	USP49-007	9034	688aa	ENSP00000377797.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69111	A6PVU2 Q70CQ1	NM_001286554.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000297229.2	USP49-201	3062	640aa	ENSP00000297229.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4861	A6PVU2 Q70CQ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373010.1	USP49-002	2446	585aa	ENSP00000362101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVU2 Q5T3E1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373009.3	USP49-202	2067	688aa	ENSP00000362100.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69111	A6PVU2 Q70CQ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423567.1	USP49-005	752	15aa	ENSP00000411603.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000437061.1	USP49-006	553	37aa	ENSP00000410003.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6PVU2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000448078.1	USP49-004	480	52aa	ENSP00000389842.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 3,062 bps, Translation length: 640 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q70CQ1

CCDS

This transcript is a member of the Human CCDS set: CCDS4861

Version

ENST00000297229.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000297229.2 USP49-201

Summary