Transcript: ENST00000505056.1 SLC45A2-004

Description

solute carrier family 45, member 2 [Source:HGNC Symbol;Acc:16472]

Gene Synonyms

1A1, AIM-1, AIM1, MATP, OCA4, SHEP5

Location

Chromosome 5: 33,963,747-33,984,667 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 9144 variant alleles and maps to 135 oligo probes.

Gene

This transcript is a product of gene ENSG00000164175.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296589.4	SLC45A2-001	1772	530aa	ENSP00000296589.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3901	Q9UMX9	NM_016180.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382102.3	SLC45A2-002	2723	460aa	ENSP00000371534.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43308	Q9UMX9	NM_001012509.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000342059.3	SLC45A2-201	1537	471aa	ENSP00000341014.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBP8 Q9UMX9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509381.1	SLC45A2-003	1040	243aa	ENSP00000421100.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGY6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345083.5	SLC45A2-202	989	298aa	ENSP00000340444.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JK74	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510600.1	SLC45A2-005	740	246aa	ENSP00000424010.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBP8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000505056.1	SLC45A2-004	739	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 739 bps,

Version

ENST00000505056.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000367168 (version 1)

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Transcript: ENST00000505056.1 SLC45A2-004

Summary