Transcript: ENST00000394729.2 PRKCD-001

Description

protein kinase C, delta [Source:HGNC Symbol;Acc:9399]

Gene Synonyms

CVID9, MAY1, PKCD, nPKC-delta

Location

Chromosome 3: 53,195,136-53,226,733 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 35 domains and features, is associated with 14069 variant alleles and maps to 739 oligo probes.

Gene

This transcript is a product of gene ENSG00000163932.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394729.2	PRKCD-001	2810	676aa	ENSP00000378217.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2870	B4DFV1 C9J9P1 C9JZU8 Q05655	NM_212539.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000330452.3	PRKCD-002	2680	676aa	ENSP00000331602.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2870	B4DFV1 C9J9P1 C9JZU8 Q05655	NM_006254.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464818.1	PRKCD-006	777	223aa	ENSP00000419629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9P1 C9JZU8 C9K0E3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478843.1	PRKCD-004	589	77aa	ENSP00000419726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZU8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000487897.1	PRKCD-005	562	125aa	ENSP00000418106.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J9P1 C9JZU8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000477794.2	PRKCD-003	404	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 2,810 bps, Translation length: 676 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q05655

CCDS

This transcript is a member of the Human CCDS set: CCDS2870

Version

ENST00000394729.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257818 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000394729.2 PRKCD-001

Summary