Transcript: ENST00000486050.1 IZUMO2-002

Description

IZUMO family member 2 [Source:HGNC Symbol;Acc:28518]

Gene Synonyms

C19orf41, MGC33947, PLAL6978, PRO21961, SCRL

Location

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 4900 variant alleles and maps to 256 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000293405.3	IZUMO2-001	728	221aa	ENSP00000293405.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12792	Q6UXV1	NM_152358.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000600293.1	IZUMO2-005	818	234aa	ENSP00000472657.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000594854.1	IZUMO2-004	893	89aa	ENSP00000469026.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486050.1	IZUMO2-002	668	93aa	ENSP00000470525.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 2, Transcript length: 668 bps, Translation length: 93 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000486050.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000157233 (version 2)