Transcript: ENST00000293405.3 IZUMO2-001

Description

IZUMO family member 2 [Source:HGNC Symbol;Acc:28518]

Gene Synonyms

C19orf41, MGC33947, PLAL6978, PRO21961, SCRL

Location

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 4940 variant alleles and maps to 274 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000600293.1	IZUMO2-005	818	234aa	ENSP00000472657.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000293405.3	IZUMO2-001	728	221aa	ENSP00000293405.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12792	Q6UXV1	NM_152358.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000594854.1	IZUMO2-004	893	89aa	ENSP00000469026.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486050.1	IZUMO2-002	668	93aa	ENSP00000470525.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 728 bps, Translation length: 221 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6UXV1

CCDS

This transcript is a member of the Human CCDS set: CCDS12792

Version

ENST00000293405.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000157232 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.