Transcript: ENST00000589437.1 NLRP4-003

Description

NLR family, pyrin domain containing 4 [Source:HGNC Symbol;Acc:22943]

Gene Synonyms

CLR19.5, CT58, FLJ32126, NALP4, PAN2, PYPAF4, RNH2

Location

Chromosome 19: 56,370,063-56,393,220 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 11805 variant alleles and maps to 260 oligo probes.

Gene

This transcript is a product of gene ENSG00000160505.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301295.6	NLRP4-001	3670	994aa	ENSP00000301295.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12936	K7ES09 Q96MN2	NM_134444.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000346986.5	NLRP4-201	3504	938aa	ENSP00000344787.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J9JIE2 K7ES09	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000587891.1	NLRP4-002	3201	919aa	ENSP00000465463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96MN2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589437.1	NLRP4-003	1781	504aa	ENSP00000468754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000587464.1	NLRP4-004	572	155aa	ENSP00000468496.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ES09	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,781 bps, Translation length: 504 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000589437.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000457369 (version 1)

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000589437.1 NLRP4-003

Summary