Transcript: ENST00000598347.1 ANKLE1-006

Description

ankyrin repeat and LEM domain containing 1 [Source:HGNC Symbol;Acc:26812]

Gene Synonyms

ANKRD41, FLJ39369, LEM3, LEMD6

Location

Chromosome 19: 17,392,728-17,397,731 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 16 domains and features, is associated with 3178 variant alleles and maps to 308 oligo probes.

Gene

This transcript is a product of gene ENSG00000160117.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394458.3	ANKLE1-003	3218	615aa	ENSP00000377971.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NAG6	NM_152363.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404085.1	ANKLE1-002	3081	611aa	ENSP00000384008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62595	J3KPY6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000594072.1	ANKLE1-001	2083	578aa	ENSP00000468845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QX15	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000598347.1	ANKLE1-006	2003	597aa	ENSP00000470895.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R002	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433424.2	ANKLE1-201	1821	439aa	ENSP00000394460.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E124	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404261.4	ANKLE1-004	1821	385aa	ENSP00000384753.4	Nonsense mediated decay		-	-	-
ENST00000596626.1	ANKLE1-005	2263	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000601401.1	ANKLE1-007	665	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596834.1	ANKLE1-008	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596099.1	ANKLE1-009	536	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,003 bps, Translation length: 597 residues

Version

ENST00000598347.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000463357 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000598347.1 ANKLE1-006

Summary