Transcript: ENST00000404085.1 ANKLE1-002

Description

ankyrin repeat and LEM domain containing 1 [Source:HGNC Symbol;Acc:26812]

Gene Synonyms

ANKRD41, FLJ39369, LEM3, LEMD6

Location

Chromosome 19: 17,392,508-17,398,455 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 15 domains and features, is associated with 3720 variant alleles and maps to 422 oligo probes.

Gene

This transcript is a product of gene ENSG00000160117.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394458.3	ANKLE1-003	3218	615aa	ENSP00000377971.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NAG6	NM_152363.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404085.1	ANKLE1-002	3081	611aa	ENSP00000384008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS62595	J3KPY6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000594072.1	ANKLE1-001	2083	578aa	ENSP00000468845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QX15	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000598347.1	ANKLE1-006	2003	597aa	ENSP00000470895.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R002	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433424.2	ANKLE1-201	1821	439aa	ENSP00000394460.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E124	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404261.4	ANKLE1-004	1821	385aa	ENSP00000384753.4	Nonsense mediated decay		-	-	-
ENST00000596626.1	ANKLE1-005	2263	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000601401.1	ANKLE1-007	665	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596834.1	ANKLE1-008	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000596099.1	ANKLE1-009	536	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 3,081 bps, Translation length: 611 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS62595

Version

ENST00000404085.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000320303 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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All species

Recent locations

Transcript: ENST00000404085.1 ANKLE1-002

Summary