Transcript: ENST00000467049.1 PTPDC1-003

Description

protein tyrosine phosphatase domain containing 1 [Source:HGNC Symbol;Acc:30184]

Gene Synonyms

FLJ37312, PTP9Q22

Location

About this transcript

This transcript has 3 exons, is associated with 3146 variant alleles and maps to 178 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000288976.3	PTPDC1-002	4398	806aa	ENSP00000288976.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6708	A2A3K4	NM_152422.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375360.3	PTPDC1-001	4517	754aa	ENSP00000364509.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6707	A2A3K4	NM_177995.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467049.1	PTPDC1-003	1861	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,861 bps,

Version

ENST00000467049.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000215008 (version 1)