Transcript: ENST00000452080.1 TBRG1-004

Description

transforming growth factor beta regulator 1 [Source:HGNC Symbol;Acc:29551]

Gene Synonyms

FLJ14621, NIAM, TB-5

Location

Chromosome 11: 124,492,795-124,496,831 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 2117 variant alleles and maps to 247 oligo probes.

Gene

This transcript is a product of gene ENSG00000154144.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000441174.3	TBRG1-001	4004	411aa	ENSP00000409016.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8448	Q3YBR2	NM_032811.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375005.4	TBRG1-201	1483	260aa	ENSP00000364144.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3YBR2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000531667.1	TBRG1-011	552	112aa	ENSP00000435448.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK87	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000284290.4	TBRG1-003	4461	160aa	ENSP00000284290.4	Nonsense mediated decay		F8W6N5 Q05BL0	-	-
ENST00000529543.1	TBRG1-005	2142	101aa	ENSP00000436599.1	Nonsense mediated decay		E9PI10	-	-
ENST00000530731.1	TBRG1-009	1571	160aa	ENSP00000436238.1	Nonsense mediated decay		F8W6N5 Q05BL0	-	-
ENST00000452080.1	TBRG1-004	730	156aa	ENSP00000395145.1	Nonsense mediated decay		E9PFP5	-	-
ENST00000438907.2	TBRG1-007	842	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491010.2	TBRG1-006	2308	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000531033.1	TBRG1-008	1809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473629.2	TBRG1-002	1634	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 730 bps, Translation length: 156 residues

Version

ENST00000452080.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000329060 (version 1)

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Transcript: ENST00000452080.1 TBRG1-004

Summary