Transcript: ENST00000507335.1 FAM105B-002

Description

family with sequence similarity 105, member B [Source:HGNC Symbol;Acc:25118]

Gene Synonyms

FLJ34884

Location

Chromosome 5: 14,664,841-14,674,246 forward strand.

About this transcript

This transcript has 2 exons, is associated with 3986 variant alleles and maps to 84 oligo probes.

Gene

This transcript is a product of gene ENSG00000154124.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000284274.4	FAM105B-001	7800	352aa	ENSP00000284274.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43302	Q96BN8	NM_138348.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506417.1	FAM105B-005	605	84aa	ENSP00000424966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000503023.1	FAM105B-003	911	58aa	ENSP00000427016.1	Nonsense mediated decay		D6RD57	-	-
ENST00000514913.1	FAM105B-004	420	66aa	ENSP00000421928.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000507335.1	FAM105B-002	742	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508678.1	FAM105B-006	469	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 742 bps,

Version

ENST00000507335.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000366013 (version 1)

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Transcript: ENST00000507335.1 FAM105B-002

Summary